Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKEDIINKLKQACSSQDVEITKSDLSKIFDALMKIIKGKLDEEGEIRLHGIGTFSTAISQEKQCRNPQNGEIMTVPQKTRVKFKASQTLLSILNKEKEEVIS
1OWF Chain:A ((18-89))
--------------------LSKRDAKELVELFFEEIRRALENGEQVKLSGFGNFDLRDKNQRPGRNPKTGEDIPITARRVVTFRPGQKLKSRVENASPK---
General information:
TITO was launched using:
RESULT:
Template:
1OWF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3778 for 354 contacts (-10.7/contact) +
2D Compatibility (PS) -7437 + (NN) -699 + (LL) 1808
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -15006.0 ( -42.39 by residue)
QMean score : 0.428
(partial model without unconserved sides chains):
PDB file :
Tito_1OWF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OWF-query.scw
PDB file :
Tito_Scwrl_1OWF.pdb
: