Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEQKIQAFEWFRALRDRVVESFLLIEGQSPTDPKIEKRKWDRPGGGGGESTIIY-GDVFEKVGVNISKVYGKFADSVVNEI--------------PGASESNG-EFWASGISLVSHMQSPLVPAAHMNTRLIYTSKQ-------WFGGGMDFTPTYKNEEDYKYIHESIKTTCDKFDAEYYLKFKEQCDNYFFLQHRKEPRGIGGIFYDNLNSGRWENDFEFTKAVGETFLKIYLHIIRQHMRKPWTKEQRETQLIKRGRYVEFNLLYDRGTKFGLMTDGN-PDAIMMSMPPLVKWM |
| 1TKL Chain:A ((50-302)) | ---------------------------------------------GGGGTSMVIQDGTTFEKGGVNVSVVYGQLSPAAVSAMKADHKNLRLPEDPKTGLPVTDGVKFFACGLSMVIHPVNPHAPTTHLNYRYFETWNQDGTPQTWWFGGGADLTPSYLYEEDGQLFHQLHKDALDKHDTALYPRFKKWCDEYFYITHRKETRGIGGIFFDDYDERDPQEILKMVEDCFDAFLPSYLTIVKRRKDMPYTKEEQQWQAIRRGRYVEFNLIYDRGTQFGLRTPGSRVESILMSLPEHASWL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TKL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77409 for 1734 contacts (-44.6/contact) +
2D Compatibility (PS) -24086 + (NN) -9211 + (LL) 3432
1D Compatibility (HY) -17200 + (ID) 5200
Total energy: -129674.0 ( -74.78 by residue)
QMean score : 0.416
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