Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLNQRYVKVFALYFVSIVTANIIVKNNNLIKTLIQTIAGYTVFAVGLKYLTKRKNK
3WU2 Chain:E ((34-49))
-------------------------------WLFVSTGLAYDVFGTP----------
General information:
TITO was launched using:
RESULT:
Template:
3WU2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2498 for 61 contacts (-41.0/contact) +
2D Compatibility (PS) -1412 + (NN) 2432 + (LL) 4056
1D Compatibility (HY) -1200 + (ID) 200
Total energy: 1178.0 ( 19.31 by residue)
QMean score : 0.016
(partial model without unconserved sides chains):
PDB file :
Tito_3WU2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WU2-query.scw
PDB file :
Tito_Scwrl_3WU2.pdb
: