Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFTAIAKAIFVLGILTTSVMITENQSVNAKGKYEKMNRLYDTNKLHQYYSGPSYELTNVSGQSQGYYDSNVLLFNQQNQKFQVFLLGKDENKYK-EKTHGLDVFAVPELVDLDGRIFSVSGVTKKNVKSIFESLRTPNLLVKKIDDKDGFSIDEFFFIQKEEVSLKELDFKIRKLLIKKYKLYEGSADKGRIVINMKDENKYEIDLSDKLDFERMADVINSEQIKNIEVNLK
2Z8L Chain:A ((17-208))
-----------------------------------------DIFDLRDYYSGASKELKNVTGYRYSKGGKHYLIFDKHQKFTRIQIFGKDIERLKTRKNPGLDIFVVKEAENRNGTVFSYGGVTKKNQGAYYDYLNAPKFVIKKEVDAGVYTHVKRHYIYKEEVSLKELDFKLRQYLIQNFDLYKKFPKDSKIKVIMKDGGYYTFELNKKLQPHRMSDVIDGRNIEKMEANIR
General information:
TITO was launched using:
RESULT:
Template:
2Z8L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52379 for 1413 contacts (-37.1/contact) +
2D Compatibility (PS) -19852 + (NN) -1567 + (LL) 3884
1D Compatibility (HY) -15200 + (ID) 3650
Total energy: -88764.0 ( -62.82 by residue)
QMean score : 0.408
(partial model without unconserved sides chains):
PDB file :
Tito_2Z8L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z8L-query.scw
PDB file :
Tito_Scwrl_2Z8L.pdb
: