Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEYEYPIDLDWSNEEMISVINFFNH-VEKYYESGVTAGDFMGAYKRFKEIVPAKAEEKQIFNTFEKSSGYNSYKAVQDVKTHSEEQRVTAKK
1SUR Chain:A ((178-210))
---VLPII-DWDNRTIYQYLQKHGLKYHPLWDEGYLS-------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1SUR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3542 for 120 contacts (-29.5/contact) +
2D Compatibility (PS) -3285 + (NN) -717 + (LL) 4368
1D Compatibility (HY) -3600 + (ID) 300
Total energy: -7076.0 ( -58.97 by residue)
QMean score : 0.393
(partial model without unconserved sides chains):
PDB file :
Tito_1SUR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SUR-query.scw
PDB file :
Tito_Scwrl_1SUR.pdb
: