Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTVGEALKGRRERLGMTLTELEQRTGIKREMLVHIENNEFDQLPNKNYSEGFIRKYASVVNIEPNQLIQAHQDEIPSNQAEWDEVITVFNNNKDLDYKSKSKEPIQLLVIMGITVLITLLLWIMLVLIF
1ZUG Chain:A ((1-58))
MQTLSERLKKRRIALKMTQTELATKAGVKQQSIQLIEAG-VTKRPR------FLFEIAMALNCDP-----------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1ZUG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14924 for 402 contacts (-37.1/contact) +
2D Compatibility (PS) -6409 + (NN) -3606 + (LL) 6244
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -23795.0 ( -59.19 by residue)
QMean score : 0.637
(partial model without unconserved sides chains):
PDB file :
Tito_1ZUG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZUG-query.scw
PDB file :
Tito_Scwrl_1ZUG.pdb
: