Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNAYDAYMKEIAQQMRGELTQNGFTSLETSEAVSEYMNQVNADDTTFVVINSTCGCAAGLARPAAVAVATQNEHRPTNTVTVFAGQDKEATATMRE-FIQQAPSSPSYALFKGQDLVYFMPREFIEGRDINDIAMDLKDAFDENCK
3FHK Chain:D ((7-146))
--AYEEYMRQLVVPMRRELTGAGFEELTTAEEVENFMEK--AEGTTLVVVNSVCGCAAGLARPAATQAVLQNDKTPDNTVTVFAGQDKEATAKMREYFTGAAPSSPSMALLKGKEVVHFIPRHEIEGHDMEEIMKNLTAAFDAH--
General information:
TITO was launched using:
RESULT:
Template:
3FHK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65361 for 1099 contacts (-59.5/contact) +
2D Compatibility (PS) -15618 + (NN) -10001 + (LL) 360
1D Compatibility (HY) -11600 + (ID) 4000
Total energy: -106220.0 ( -96.65 by residue)
QMean score : 0.655
(partial model without unconserved sides chains):
PDB file :
Tito_3FHK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FHK-query.scw
PDB file :
Tito_Scwrl_3FHK.pdb
: