Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKRLKEKSNDEIVQNTINKRINFIFGVIVFIFAVLVLRLGYLQIAQGSHYKQIIKNDENITVNESVPRGRILDRNGKVLVDNASKMAITYTRGRKTTQSEMLDTAEKLSKLIKMDTKKITERDKKDFWIQLHPKKAKAMMTKEQAMLADGSIKQDQYDKQLLSKIGKSQLDELSSKDLQVLAIFREMNAGTVLDPQMIKNEDVSEKEYAAVSQQLSKLPGVNTSMDWDRKYPYGDTLRGIFGDVSTPAEGIPKELTEHYLSKGYSRNDRVGKSYLEYQYEDVLRGKKKEMKYTTDKSGKVTSSEVLNPGAR-GQDLKLTIDIDLQKEVEALLDKQIK-KLRSQGAKDMDNAMMVVQNPKNGDILALAGKQINKSGKMTDYDIGTFTSQ-----FAVGSSVKGGTLLAGYQNKAIKVGETMVDEPLHFQGGLTKRSYFNKNGHVSINDKQ-----ALMHSSNVYMFKTALKLAGDPYYSGMALPSDISSPAQKLRRGLNQVGLGVKTGIDLPNETRGQIEPLTNNP-GNYLDLSIGQYDTYTPLQLSQYVSTIANDGYRIQPHIGLTIHESTNKDEVGPLKKKINGTVLNKVNNTEKEIKQIQEGFKMAFNDKDGTGYVSFKDTVVPTAGKTGTAEVFQNG-----EPRVNSTYIGYAPIDDPKLAFSIVYTNQPVPPPWLTGGDLGRDVINYYFKQLGKDDKNKDKDK |
| 4KQQ Chain:A ((126-508)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KVPGVYSIEEFRRFYPAG-------------------EVVAHAV--GFTDVDDRGREGIELAFDEWLAGVPGKRQVLKDRRGRVIKDVQVTKNAKPGKTLALSIDLRLQY----LAHRELRNALLENGAK---AGSLVIMDVKTGEILAMTNQPTYNPNNRRNLQPAAMRNRAMIDVFEPGSTVKPFSMSAALASGRWKPSD-IVDV---YPGTLQIGRYTIRD--VSRNSRQLDLTGILIKSSNVGISKIAFDIGAESIYSVM-----------------QQVGLGQDTGLGFPGERVGNLPNHRKWPKAETATLAYGYGLSVTAIQLAHAYAALANDGKSVPLSM-------TRVDRVPDGVQVISPEVASTVQGMLQQVVEAQGGVFRA----QVPGYHA--------AGKSGTARKVSVGTKGYRENAYRSLFAGFAPATDPRIAMVVV--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KQQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11518 for 2903 contacts (-4.0/contact) +
2D Compatibility (PS) -37666 + (NN) -7144 + (LL) 20712
1D Compatibility (HY) -18400 + (ID) 5550
Total energy: -59566.0 ( -20.52 by residue)
QMean score : 0.450
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