Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIALGCDHIVTDTKMRVSEFLKSKGHEVIDVGTYDFTRTHYPIFGKKVGEQVVSGNADLGVCICGTGVGINNAVNKVPGVRSALVRDMTSALYAKEELNANVIGFGGRIIGELLMCDIIDAFINAEYKATEENKKLIAKIKHLETSNADQADPHFFDEFLEKWDRGEYHD
3PH3 Chain:A ((21-164))
MKIGIGSDHGGYNLKREIADFLKKRGYEVIDFGTHGNESVDYPDFGLKVAEAVKSGECDRGIVICGTGLGISIAANKVPGIRAAVCTNSYMARMSREHNDANILALGERVVGLDLALDIVDTWLKAEFQGGRHATR-VGKIGEIE--------------------------
General information:
TITO was launched using:
RESULT:
Template:
3PH3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110511 for 1218 contacts (-90.7/contact) +
2D Compatibility (PS) -15382 + (NN) -5259 + (LL) 1220
1D Compatibility (HY) -9600 + (ID) 3000
Total energy: -142532.0 ( -117.02 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_3PH3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PH3-query.scw
PDB file :
Tito_Scwrl_3PH3.pdb
: