Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFSKSLEALHHVKRYRKRELFDPLLKDYASNDYLGLSVKKDLLQNAFDKLQSFDCHSPKASMLVNGYHPLHAELEERLADLLEFESALLVGSGFLGNLALIDTLLVKNALLFMDAHYHASGIFSTKIKPNQVIFFSHNDIKDLKQKLFNAPKNKLKFIAIEGVYSMDASIAPYDFYEIIQETPNAFLIVDEAHSFGTIGENLLGFLEYHRIKEKDKIIKLSTFSKALASYGACVLAPLQVIEFLTNRAKSVIYTTAL--SLLDTALTLAHLEYFIAQKQE--LKNELSKHQQIIFETLGVRTPT-----GFFTLEFENNPALLNAQYFLKEKGFLVGAIRPPTVSKP--LLRVSLSLKNSLEDTKELANALLDYSKIQSSFKSG |
| 2W8J Chain:A ((73-397)) | -------------------------------NYMGMTFDPDVIAAGKEALEKFGSGTNGSRMLNGTFHD-HMEVEQALRDFYGTTGAIVFSTGYMANLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRHNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFV-VGTFSKSVGTVGGFVVSNHPKFEAVRLACRPYIFTASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGL--KAMGFRLGTETCDSAIVAVMLEDQEQAAMMWQALLDGGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAVGVIG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W8J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192187 for 2674 contacts (-71.9/contact) +
2D Compatibility (PS) -33896 + (NN) -11202 + (LL) 3268
1D Compatibility (HY) -22000 + (ID) 4400
Total energy: -260417.0 ( -97.39 by residue)
QMean score : 0.499
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