Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRHVIAFGLKIEILKKYKRTLQAHDDLRQ-LEPLGFENTQGSVYLKDQ
1ZPW Chain:X ((3-40))
KRLYAVAYDIPD---------DTRRVKLANLLKSYG-ERVQLSVFECYL
General information:
TITO was launched using:
RESULT:
Template:
1ZPW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9156 for 180 contacts (-50.9/contact) +
2D Compatibility (PS) -3994 + (NN) -225 + (LL) 1052
1D Compatibility (HY) -1200 + (ID) 400
Total energy: -13923.0 ( -77.35 by residue)
QMean score : 0.338
(partial model without unconserved sides chains):
PDB file :
Tito_1ZPW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZPW-query.scw
PDB file :
Tito_Scwrl_1ZPW.pdb
: