Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKGSLAIVLGSLLASGTFYTALADGMPMKQQHNNMGESVELHFHYPIKGKQEPKNNHLVVLIDPKIEANKVIPENYQKEFEKSLFLQLSNFLERKGYSVSQFKDVSEIPQDIKEKALLVLRMDGNVAILEDIVEESDALSEEKVIDMSSGYLNLNFVEPKSEDIIHSFGIDVSKIKAVIERVELRRTNSGGFVPKTFVHRIKETDHDRAIKKIMNQAYHKVMAHITKELSKKHMERYEKVSSEMKKRK |
2LCI Chain:A ((11-44)) | ---------------------------------------------------------------------------------NDELIKKIKKEVENQGYQVRDVNDSDELKKEMKKLAEEKNFEKILIISNDKQLLKEMLELISKLGYKVFLLLQDQDENELEEFKRKIESQGYEVRKVTDDEEALKIVREFMQKAGSLEHHHHHH-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LCI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1094 for 142 contacts (-7.7/contact) +
2D Compatibility (PS) -3532 + (NN) -1472 + (LL) 8824
1D Compatibility (HY) -2400 + (ID) 400
Total energy: -74.0 ( -0.52 by residue)
QMean score : 0.386
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