Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLERYANEEMKALWNEQTKFETYLEVEKAVVRAWNKLGQIQDSDC---EKICLKAAFNLERIKEIEKTTKHDLI----AFTTCVAESLGEESRFFHYGITSSDCIDTAMALLMTKSLKLIQKGVKNLYETLKNRALEHQDTLMVGRSHGVFGEPITFGLVLALFADEIKRH---LKALDLTMEFISVGAISGAMGNFAHAPLELEELACGFLGLKTANISNQVIQRDRYARLACDLALLASSCEKIAVNIRHLQRSEVYEVEEAFSAGQKGSSAMPHKRNPILSENITGLCRVIRSFTTPMLENVALWHERDMSHSSVERFALPDLFITSDFMLSRLNSVIENLVVYPKNMLKNLALSGGLVFSQRVLLELPKKGLSREESYSIVQENAMKIWEVLQQGAFKNADENLFLNALLNDE-RLKKYLNESEIRACFDYSYYTKNVGAIFKRVFG |
1RE5 Chain:A ((10-430)) | ----FTAPAMREIFSDRGRLQGMLDFEAALARAEASAGLVPHSAVAAIEAACQAERYDTGALANAIATAGNSAIPLVKALGKVIATGVPEAERYVHLGATSQDAMDTGLVLQLRDALDLIEADLGKLADTLSQQALKHADTPLVGRTWLQHATPVTLGMKLAGVLGALTRHRQRLQELRPRLLVLQFGGASGSLAALGSKAMPVAEALAEQLKLTLPEQPWHT-QRDRLVEFASVLGLVAGSLGKFGRDISLLMQTEAGEVFEPSAP----------KRNPVGAAVLIGAATRVPGLLSTLFAAMPQEHERSLGLWHAEWETLPDICCLVSGALRQAQVIAEGMEVDAARMRRNLDLTQGLVLAEAVSIVLAQR-LGRDRAHHL-----------LEQCCQRAVAEQRHLRAVLGDEPQVSAELSGEELDRLLDPAHYLGQARVWVARAVS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1RE5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -211087 for 3216 contacts (-65.6/contact) +
2D Compatibility (PS) -42601 + (NN) -18954 + (LL) 2068
1D Compatibility (HY) -19200 + (ID) 5350
Total energy: -295124.0 ( -91.77 by residue)
QMean score : 0.429
|
|
|