Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAISKEEVLEYIGSLSVLELSELVKMFEEKFGVSATPTVVAGAAVAGGA------------AAESEEKTEFNVILADS-GAEKIKVIKVVRE-ITGLGLKEAKDATEKTPHVLKEGVNKEEAETIKKKLEEVGAKVEVK
2FTC Chain:E ((4-134))
-----QQLVQDIASLTLLEISDLNELLKKTLKIQDVGLMPMGGMVPGAAPAPTAPEAAEEDVPKQKERTHFTVRLTEAKPVDKVKLIKEIKNYVQGINLVQAKKLVESLPQEIKANVAKAEAEKIKAALEAVGGTVVLE
General information:
TITO was launched using:
RESULT:
Template:
2FTC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 883116 for 5995 contacts (147.3/contact) +
2D Compatibility (PS) -10804 + (NN) 2583 + (LL) 592
1D Compatibility (HY) -2400 + (ID) 700
Total energy: 872387.0 ( 145.52 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_2FTC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FTC-query.scw
PDB file :
Tito_Scwrl_2FTC.pdb
: