Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEYKDTLNLNETTFSMKGNLSVNEPKTYAKWQEQQAFKRMQNRKDNHGDFTLHDGPPYANGHLHLGHALNKILKDIVIKREYFKGKKIYYTPGWDCHGLPIEQQILEQLEKEKTSLENPTLFREKCRDHAKKFLEIQKNEFL----QLGVLGDFEDPYKTMDFKFEASIYRALVGVAKKGLLKERHKPIYWSYACESALAEAEVEYKMKKSPSIFVAFDLKKEGLEKLKVKKASLVIWTTTPWTLYANVAIALKKDAVYALTQKGYLVAKALHEKLAALGVVDNAITHEFNSNDLEYLVATNPLNQRDSLVVLGDHVSLEDGTGAVHTAPGHGEEDYYLGLKYHLEVLMSVDEKGCYDEGIIHNQLLDKSYLGEHIFKAQKRIIEQLGDS--LLLEREIEHSYPHCWRTHKPVIYRATTQWFILMDEPFIQNDGSQKTLREVALDAIEK--VEFVPSSGKNRLKTMIENRPDWCLSRQRKWG--VPLAFFIDKRTNKPCFESEVLEHVANLFEEKGCDVWWEYNIKDLLPPSYQDNAKHYEKVMHILDVWFDSGSTFKAVL---EDYHGEKGQSPSDVVLEGSDQHRGWFQSSLLIGCVLNNQAPFKKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKKHGSDVVRLWVAF-NDYQNDLRVSQTFFIQTEQHYKKFRNTLKFLLANFSDMDLKNLERPHDFSPL-DHFILEALETISAGVNSAFEEHDLVKGLNILMAFVTNELSGIYLDACKDSLYCDSKNNEKRQAIQMVLLAVASQLCYFLAPILTHTIEEVLEHSQVLRAFLQAKDVFDLKGISVLEKLHLKEFKKPENFEAVLALRSAFNEELDRLKKEGVVKNSLECAIEVKEKALCENLVEELLMVSFVGVAKEKLSETPAFTLFKAPFYKCPRCWRFKSELENTPCKRCEEVLKER |
| 1IVS Chain:A ((13-694)) | ------------------------EPKWAEKWAKNPF---VANPKSGKPPFVIFMPPPNVTGSLHMGHALDNSLQDALIRYKRMRGFEAVWLPGTDHAGIATQVVVERLLLKEGKTRHD--LGREKFLERVWQWKEESGGTILKQLKRLGASADWSREAFTMDEKRSRAVRYAFSRYYHEGLAYRAPRLVNWCPRCETTLSDLEVE--TEPTPGKLYTLRYEVEG-------GGFIEIATVRPETVFADQAIAVHPE--------------------------DERYRHLLGKR------ARIPLTEVWIPILADPAVEKDFGTGALKVTPAHDPLDYEIGERHGLKPVSVINL-----EGRMEGERVPEALRGLDRFEARRKAVELFREAGHLVKEEDYTIALATCSRCGTPIEYAIFPQWWLRM-----------RPLAEEVLKGLRRGDIAFVPERWKKVNMDWLENVKDWNISRQLWWGHQIPAWYCED------CQAVNVPRPERYLEDPTSCEA---------------CGSPRLKRDEDVFDTWFSSALWPLSTLGWPEETEDLKAFYPGDVLVTGYDILFLWVSRMEVSGYHFMGERPFKTVLLHGLVLDEKGQKMSKSKGNVIDPLEMVERYGADALRFALIYLATGGQDIRLDLRWLEMARNFANKLYNAARFVLLSREGFQAK-----EDTPTLADRFMRSRLSRGVEEITALYEALDLAQAAREVYELVWSEFCDWYLEAAKPAL--KAGNAHTLRTLEEV-LAVLLKLLHPMMPFLTSELYQALTGKEELALEAWPEPGGRDEEAERAFEALKQAVTAVRALKAEAGLPPAQEVRVYLEGETAPVEENLEVFRFLSRADLLPERPAKALVKAMPRVTARMPLEGLLDVEEWRRRQEKRLKELLALAERSQRKLASPGFREKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IVS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -279558 for 5629 contacts (-49.7/contact) +
2D Compatibility (PS) -71497 + (NN) -26143 + (LL) 7516
1D Compatibility (HY) -27600 + (ID) 9150
Total energy: -406432.0 ( -72.20 by residue)
QMean score : 0.400
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