Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIDKFLQSVGLVKRRVLATDMCNVGAVWLNGSCAK-PSKEVKTGDVISLHYLKGIEEYTILQIPTLKNVPRKDTHLYIAPKTKE
1C06 Chain:A ((52-100))
-RLDNLVYRLGLARTRRQARQLVTHGHILVDGSRVNIPSYRVKPGQTIAVREKSRNLQVIKEALEANNYIPDYLSFDPEKMEGTY
General information:
TITO was launched using:
RESULT:
Template:
1C06.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37226 for 302 contacts (-123.3/contact) +
2D Compatibility (PS) -4960 + (NN) 506 + (LL) 208
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -45022.0 ( -149.08 by residue)
QMean score : 0.451
(partial model without unconserved sides chains):
PDB file :
Tito_1C06.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C06-query.scw
PDB file :
Tito_Scwrl_1C06.pdb
: