Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFINIEKKWQEFWWKNKSFEPKDDFNLPKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYNVLHPMGFDSFGMPAENAAIKHGIHPKTWTYENIEAMQKEFEALGFSFSKNREFATSDPDYTKFEQQFFIDLWEKGLIYRKKAMLNWCPNDKTVLANEQVIDGRCWRCDTEVIQKELYQYYLKITNYAEELLKDLETLENHWPSQVLTMQKNWIGKSSGLQFGFKIADECLKACNNIQEIEVFTTRADTIYGVTYIAIAPEHPLVEHAIKRVSQEDSKMIKAILNTTQRERALEKKGAFLGIYAIHPLTKQKIPVWVANFALANYGSGALMGVPACDERDFEFANLYHIPIK-VITQSPQNLPH------TKEEILKNSGEWSDLSSSVAREKIIAYFEKENLGKRVINYRLQDWGVSRQRYWGAPIPMIHCKHCGIV--PETQLPVTLPEDIVIDGEGNPLEKHASWKFAQCPKCHKDALRETDTMDTFIQSSWYFLRYTTPKNQRENQAFDQNYLKYFMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLHLDEPFKQLITQGMVLKDG--------------------------------------------AKMSKSKGNVVSPKEILKKYGADAVRLFILFAAPPAKELEWNDNALEGAHRFIKRLYDKANAITPTTSKPEFKEVGLNEAQKLARKKVYEALKKSHEIFNKAESAYAFNTLIASCMEALNAL-----NAQSDEQILCEGYFVLLQILEPMIPHTAWELSERLFKRENFK----PIEVDESALIEDFMTLGLTINGKRRAELKVNINASKEEIIILAKKE--LEKYLENASVKKEIYVPNKLVNFVTA |
| 3ZJV Chain:A ((30-880)) | -----IESKVQLHWDEKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLVYKKTSAV------------------------------EIPQWFIKITAYADELLNDLDKLD-HWPDTVKTMQRNWIGRSEGVEITFNVND-----YDNT--LTVYTTRPDTFMGCTYLAVAAGHPLAQKAAEN-NPELAAFIDECRN------TMEKKGVDTGFKAVHPLTGEEIPVWAANFVLMEYGTGAVMAVPGHDQRDYEFASKYGLNIKPVILAADGSEPDLSQQALTEKGVLFNSGEFNGLDHEAAFNAIADKLTAMGVGERKVNYRLRDWGVSRQRYWGAPIPMVTLEDGTVMPTPDDQLPVILPEDVVMDGITSPIKADPEW--AKTTVNGMPALRETDTFDTFMESSWYYARYTCP--QYKEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQLLCQGMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSKSKNNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEGANRFLKRVWKLVYEHTAKGDVAALNVDALTENQKALRRDVHKTIAKVTDDIGRRQT---FNTAIAAIMELMNKLAKAPTDGEQDRALMQEALLAVVRMLNPFTPHICFTLWQELKGEGDIDNAPWPV-ADEKAMVEDSTLVVVQVNGKVRAKITVPVDATEEQVRERAGQEHLVAKY--------VIYVPGKLLNLVVG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZJV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -387960 for 6044 contacts (-64.2/contact) +
2D Compatibility (PS) -79005 + (NN) -28826 + (LL) 4980
1D Compatibility (HY) -66000 + (ID) 17050
Total energy: -573861.0 ( -94.95 by residue)
QMean score : 0.490
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