Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKKFLSILSILVLALLVTACGSDSSDKKSAKKEEKMETVTYIADINGAKLEATFSHVGDNLRKVDQKMVYPLTALGLESGANLDDATKKQLEEQVASQYSAYKESKGASLETKFTDEALELTMSVDLYKADKDSVASLLGGTTDPKNVSLKETVKQFE----AQGFKKKES
2JOE Chain:A ((3-128))---------------------------------DKEESKKFSANLNGTEIAITYVYKGDKVLKQSSETKIQFASIG----ATTKEDAAKTLEPLSAK----YKNIAGVEEKLTYTDTYAQENVTIDMEKVDFKALQGISGINVSAEDAKKGITMAQMELVMKAAGFK----


General information:
TITO was launched using:
RESULT:

Template: 2JOE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -6407 for 835 contacts (-7.7/contact) +
2D Compatibility (PS) -12424 + (NN) 722 + (LL) 3336
1D Compatibility (HY) -1200 + (ID) 1550
Total energy: -17523.0 ( -20.99 by residue)
QMean score : 0.335

(partial model without unconserved sides chains):
PDB file : Tito_2JOE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JOE-query.scw
PDB file : Tito_Scwrl_2JOE.pdb: