Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LYKLIAIDIDGTLLT-DDHKVTDEVKEAIRQAKLKGVKVVLCTGRPLVGVENYLTELELREEGDYVISFNGAFVQDTFTKEVISHLTLGIEDLKDIYEVSLNSNLHMHFFDDK--ALYTPNREIGKYTIVEAYLTGSQLIYKEIENVPEDFIMSKAMFIEEAPELEVGIAKIPESFREKYHLVRSTPFYLEILNRDASKGNAVKELSEKLGIKQSEVICIGDQENDVTMLEFAGLGIAMGNAPERIKQLADYTTASNNDSGVAKAIQKFVLDK |
| 2RBK Chain:A ((1-258)) | MTKALFFDIDGTLVSFETHRIPSSTIEALEAAHAKGLKIFIATGRPKAIINN-LSELQDRNLIDGYITMNGAYC--FVGEEVIYKSAIPQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKK--IFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEEEEKEV-LPSIPTC-----EIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKHF---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2RBK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -140644 for 2284 contacts (-61.6/contact) +
2D Compatibility (PS) -27880 + (NN) -13119 + (LL) 956
1D Compatibility (HY) -16000 + (ID) 3950
Total energy: -200637.0 ( -87.84 by residue)
QMean score : 0.484
|
|
|