Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGRKWANIKEKKASKDKTNSRIYAKFGIEIYVAAKSGDPDPHSNQKLRFVIERAKTYNVPKHIIDRAIEKAKGTGDETYSELRYEGFGPNGSMIIVDALTNNVNRTASDVRAAYSKNGGNMGVSGSVAYMFDNTAIFGVEGKDADELLELLMEADIDVRDILDEDGQAIIYAEPEDFHKVQEGLKAAGIEEFTVAEIEMIPQNDIQLSGEDLEKFERLIDALEDLEDVQKVYHNVELED |
1YJ7 Chain:A ((8-83)) | -----------------------------------------------------------------------------------------------------------------------------------------GLTEKEANQMQALLLSNDVNVSKEMDKSGNMTLSVAAADFVRAITILNNNGFPKKKFADIEVI--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YJ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15817 for 360 contacts (-43.9/contact) +
2D Compatibility (PS) -6915 + (NN) -3922 + (LL) 10032
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -21472.0 ( -59.64 by residue)
QMean score : 0.466
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