Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIFCGIMSIQAGFIGALAEILSPDSKKNNLFMIPEDLAASSGYLMSLAMVLAGILIICAYRNDFLIFMALILWLFGLIFGLIFTPSYSGFYFRPIVCLISFLMGLFIFTDYTRHQDTGEER
2ZXE Chain:G ((13-42))
--------------------------------TYDYYRLRVVGLIVAAVLCVIGIIILLAGK------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2ZXE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4498 for 111 contacts (-40.5/contact) +
2D Compatibility (PS) -3216 + (NN) -2291 + (LL) 7244
1D Compatibility (HY) -3200 + (ID) 250
Total energy: -6211.0 ( -55.95 by residue)
QMean score : -0.085
(partial model without unconserved sides chains):
PDB file :
Tito_2ZXE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZXE-query.scw
PDB file :
Tito_Scwrl_2ZXE.pdb
: