Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKPIEEIGEEIGAKVEKVARKTGNVAGTAAKLSVYSSIWAVKTGVNKTRAFAQGFKQGWSGK
1HTA Chain:A ((29-52))
LAKVLEEMGEEIASEAVKLAKHAG---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1HTA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 727 for 86 contacts (8.5/contact) +
2D Compatibility (PS) -2649 + (NN) -509 + (LL) 2364
1D Compatibility (HY) -1600 + (ID) 550
Total energy: -2217.0 ( -25.78 by residue)
QMean score : 0.565
(partial model without unconserved sides chains):
PDB file :
Tito_1HTA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HTA-query.scw
PDB file :
Tito_Scwrl_1HTA.pdb
: