Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEEKGILLQSGTNELEIVTFTVGENLFCINVLKVKEIIHPLEVTPVPDSNPAIEGVSQVRGEIMPVVNLARVMKLPEIEPENTKFIITELNQMKIVFRVDEVHRIQRISWEQIEEPEKLSIGLEELAVGIVKLDGNLVLLLDYEKIIYEISGNADFAVTGEDRIARKVNREEKTIFIAEDSQMLRQLLEDTLHEAGYTNLQFFANGREAQEHIFKLLKEQKEQTFENVNLLITDIEMPQMDGHHLTKVIKEDEIGRELPVVIFSSLITEDLEHKGAGVGADAQVSKP-NIHQLINILDELVL |
4H60 Chain:A ((5-120)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLAVDDSISIRQMVSHTLQDAGY-EVETAADGREA------LAKAQKAR----FDVIISDVNMPVMTGFEFVKAVRMQSQYKFTPILMLTTETSPEKKQEGKAVGATGWLVKPFNPETLLKTLQRVL- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4H60.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -76007 for 912 contacts (-83.3/contact) +
2D Compatibility (PS) -12603 + (NN) -6961 + (LL) 15572
1D Compatibility (HY) -6400 + (ID) 1750
Total energy: -88149.0 ( -96.65 by residue)
QMean score : 0.599
|
|
|