Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYQSLSNIIINLQANKDLLLQQDNEVDRIKSILPLVVARNSIIETLGRNPVWGISLTDDVNNLKIDNQLVTEVIPFDWNNETLYLCYFSDLESSNSPSEMGISFQLVNIFSLS
3GEK Chain:A ((92-132))
----------------------------------FVNARGLLLKNGKRNHVWEIKITDENETLISQITVVNALVP--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3GEK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61 for 199 contacts (-0.3/contact) +
2D Compatibility (PS) -4393 + (NN) 204 + (LL) 4840
1D Compatibility (HY) -3600 + (ID) 650
Total energy: -3660.0 ( -18.39 by residue)
QMean score : 0.106
(partial model without unconserved sides chains):
PDB file :
Tito_3GEK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GEK-query.scw
PDB file :
Tito_Scwrl_3GEK.pdb
: