Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKESGDIKDQHFTDIISYLNEGDALVLNDTRVLPARLHGIKDETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITFGDGALKATCLEELEHGGRILEFSYEGIFYEVLEQLGEMPLPPYIKEQLADQDRYQTVYAKENGSAAAPTAGLHFTEDLLEQISAKGVEIIFVTLHVGLGTFRPVDVEDTTNHKMHSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISPGYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGDAMFIH |
| 1VKY Chain:B ((16-346)) | ---SEFDYELPPELIAQEPVEPRDASRLMVLHRKTQRIEHRIFREIIEYLEPGDLLVLNVSKVIPARLYA-RK--GASIEILLIERLEEGIWKCLVRPGQKVKKGTELVI-DEDLSAVCLGRGEDGTRILKFQPQD--DRLIFEKG--------------------------------TAGLHFTPELIEKLKKKGVQFAEVVLHVGI----------------HEEFYQVPKETVRKLRETRERGNRIVAVGTTTVRTLETIARLPEQEEYV--GKTDLFIYPPFEFKLVDALVTNFHLPRSTLLMLVAAFAGKDFVMEAYREAVKRRYRFFSFGDAMLI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VKY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204704 for 2240 contacts (-91.4/contact) +
2D Compatibility (PS) -30255 + (NN) -6181 + (LL) 3668
1D Compatibility (HY) -32000 + (ID) 6650
Total energy: -276122.0 ( -123.27 by residue)
QMean score : 0.567
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