Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVKICGLKKAVDVAAAVENGADMIGFVF-AKSKRQVTVDEAHELAKNIPAGVKKVGVFVNPTEEELTAAIKGVPLDIVQLHGQEPAEQANRTDAEVIKAFPVKDGKLPDNINDYPNAYILLDAPAEEYEGGSGKTFDWDKIDRDLLTKNKLIIAGGLNAQNVQEAIKRFEPYAVDISSGVETNGEKDPQKIKCFIKTAKGVE
2KZH Chain:A ((5-84))
---KVCGLTRGQDAKAAYDAGAIYGGLIFVATSPRCVNVEQAQEVMAAAP--LQYVGVFRNHDIADVVDKAKVLSLAAVQLHGNE----------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2KZH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44385 for 557 contacts (-79.7/contact) +
2D Compatibility (PS) -9205 + (NN) -7910 + (LL) 6660
1D Compatibility (HY) -5200 + (ID) 1600
Total energy: -61640.0 ( -110.66 by residue)
QMean score : 0.653
(partial model without unconserved sides chains):
PDB file :
Tito_2KZH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KZH-query.scw
PDB file :
Tito_Scwrl_2KZH.pdb
: