Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LETWITSIMADFGYIGIFVLIMVENLFPPIPSEIILTFGGFMTTVTSLNVVMVIIVATLGSVVGAILLYKVASYFGKERLTKIVLKYGRILRLKESDIERAENFFLKYGSWAVFLCRMIPLIRSLISIPAGMTKMKMSKFLILTTAGSLLWNTVLIGLGAMLGESWSEIVVFMDSFSTIIYSIIAILVVVGLGFFFRARFKKTLDEE |
| 1TPX Chain:A ((127-141)) | ----------------------------------------------------------------GLGGYMLGSAMSRPL-------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TPX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -835 for 34 contacts (-24.6/contact) +
2D Compatibility (PS) -1493 + (NN) 1065 + (LL) 17712
1D Compatibility (HY) -400 + (ID) 100
Total energy: 15949.0 ( 469.09 by residue)
QMean score : -0.542
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