Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGKYFGTDGVRGVANSELTPELAFRLGR-MGGYVLTRHVGEHPRVLVARDTRISGEMLESALIAGLVSVGIEVMRLGVISTPGVAYLTKAQGASASVMISASHNPVDDNGIKFFGSDGFKLSDDQEEEIEQLLDTAEDTLPRPSGEGLGTVSDYFEGKQKYIQYLKQTIENDF---NGYHIALDCANGATSGLATHLFADLDADISSMGASPNGLNINDGVGSTHPEALAAFVLDKK---ADVGLAFDGDGDRVIAIDEIGQIVDGDKIMFICAKYL--REQG--LLNNNTIVSTVMSNLGFYKGLKELEIEDVQTAVGDRYVVEAMREGNYNLGGEQSGHIIFLDHNT-TGDGLLSGIQLINVMKATGKKLSELAAEMKTFPQKLENIRVSDKNHVTDNPKVSKVIDEVEAE-MAGNGRV---------------LVRPSGTEPLVRVMVEAATKEETDEYCERISAVVRSEMALND |
| 2H5A Chain:X ((19-456)) | ---------IRGVVGDTLTAETAYWIGRAIGSESLAR--GE-PCVAVGRDGRLSGPELVKQLIQGLVDCGCQVSDVGMVPTPVLYYAANVLEGKSGVMLTGSHNPPDYNGFKIVVA-GETLANEQIQALRERIEKND------LASGVGSV----EQVDILPRYFKQ-IRDDIAMAKPMKVVVDCGNGVAGVIAPQLIEALGCSVIPLYCEVDGNFPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRNPGADIIFDVKCTRRLIALISGYGG------RPVMWKTGHSLIKKKMKETGALLAGEMSGHVFFKERWFGFDDGIYSAARLLEILSQDQRDSEHV---FSAFPSDISTPEINIT--VTEDSKFA-IIEALQRDAQWGEGNITTLDGVRVDYPKGWGLVRASNTTPVLVLRFEADTEEE----LERIKTVFRNQLKAVD |
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General information:
TITO was launched using:
| RESULT:
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Template: 2H5A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134311 for 3660 contacts (-36.7/contact) +
2D Compatibility (PS) -43558 + (NN) -16261 + (LL) 1724
1D Compatibility (HY) -31200 + (ID) 6550
Total energy: -230156.0 ( -62.88 by residue)
QMean score : 0.500
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