Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMKTNDVLLRNVTKVVAFIIFLFSLHLFFAGHYNPGGGFVAGLTTAGAITLTLLAYDTKTVASMLNINTIMLTGVGLVFALGTGMIGIFTGDPFLTHKFGHVDLPILGDTALHTATLFDLGVYLVVVGVTLTIIQTIGESD
1ZRT Chain:C ((8-75))
-------------------------------HYEPKTGIEKWLHDR--LPIVGLVYDTIMIPTPKNLNWWWIWGIVLAFTL---VLQIVTGIVLAMHYTPHVDL-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1ZRT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17310 for 285 contacts (-60.7/contact) +
2D Compatibility (PS) -6702 + (NN) 2422 + (LL) 5880
1D Compatibility (HY) -6400 + (ID) 1150
Total energy: -23260.0 ( -81.61 by residue)
QMean score : -0.300
(partial model without unconserved sides chains):
PDB file :
Tito_1ZRT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZRT-query.scw
PDB file :
Tito_Scwrl_1ZRT.pdb
: