Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNVTSYKEMLAKPWGKIQYEITFAQLSHIKNQNVLDFGAGFCLTAQHLAKE--NNVTAIEPNPKLLYDNQSDNIYKILGSYEAL----RDLPNQSFDTIICHNVLEYIDKHNHPAYFDEFSRLLKPNGELSLIKHNITGKILQSVIFSNDTSTAMELLTGEANFKSASFDQGNIYTLEELKQNTNLLVERYQGIRTFYSLQPNHFKTETGWLNKMLAIELSVADKAPYKDIAFLQHITLKKSL |
4IV0 Chain:A ((73-172)) | -------------------------------NSKVLDIGSGLGGGCKYINEKYGAHVHGVDICEKMVTIAKLRNQDKAKIEFEAKDILKKDFPESTFDMIYSRDSILHLSYADKKMLFEKCYKWLKPNGILLITDYCADKIENWDEEFKAYIKKRKYTLMPIQEYGDLIKSCKFQNVEAKDISDYWLELLQLELSKLEEKKEEFLKVYSIKEYNSLKDGWTRKIKDTKRDLQKWGYFKAQKMI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IV0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33893 for 682 contacts (-49.7/contact) +
2D Compatibility (PS) -9903 + (NN) -375 + (LL) 2760
1D Compatibility (HY) -4400 + (ID) 1200
Total energy: -47011.0 ( -68.93 by residue)
QMean score : 0.385
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