Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDYVTTQILSILGILAGACLSYLKFAQGNSLLGIIWAAFALMYIVRLYKAYQKQKKEKP
1Q90 Chain:M ((15-32))
--------GMTLVGLAIGFVLLRVESLVE-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Q90.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5873 for 64 contacts (-91.8/contact) +
2D Compatibility (PS) -1754 + (NN) -180 + (LL) 3968
1D Compatibility (HY) -1200 + (ID) 150
Total energy: -5189.0 ( -81.08 by residue)
QMean score : -0.156
(partial model without unconserved sides chains):
PDB file :
Tito_1Q90.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q90-query.scw
PDB file :
Tito_Scwrl_1Q90.pdb
: