Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIIAITEKVIKELFRDKRTLAMMFLAPILIMFLMNVMFSANSNTKVKIGTINVNTKVVSNLDNIKHIKVRSFKFNSSAKKALKSNKIDALISEDNKSYTLFYANTDSSKTTLTRQAFKTAVNTMNSKELISQVKILANKNPKLAQSLQTRSKYIKEKYNYGNKNTGFFAKMIPILMG----FMVFFFVFLISGMALLKERTSGTLDRL-LATPVKRSDIVFGYML----------SYGILAIIQTIVIVLSTIWLLDIQVVGSIFSVIIVNFILALVALSLGILMSTLAKSEFQMMQFIPLIIMPQLFFSGIIPLENMANWAQTVGKILPLSYSGDALTKIIMYGQGLSNVSSNLLVLLLFLIILTIANIFGLKRYRKV |
| 3PUW Chain:F ((414-497)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------FFKITLPLLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVNYTYRIAFEGGGGQDFGLAAAIATLIFLLVGALAI--------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PUW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29738 for 338 contacts (-88.0/contact) +
2D Compatibility (PS) -7070 + (NN) -2431 + (LL) 24568
1D Compatibility (HY) -7200 + (ID) 1100
Total energy: -22971.0 ( -67.96 by residue)
QMean score : 0.138
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