Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIELLLALLLWNILVFATYAIDKRRAIRGAWRISEKTLLIESLLLGGFGAFLGGEVFRHKTTKWYFRLVWYIGMIIDLAIIWLIWCY
2PZZ Chain:A ((80-99))
----------------TKFYLNKQAAYVGAVNFDIDTHGGIFVKILADENEDIMKIIKDIAPRTKGGVIIN----------------
General information:
TITO was launched using:
RESULT:
Template:
2PZZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6144 for 89 contacts (69.0/contact) +
2D Compatibility (PS) -2195 + (NN) 383 + (LL) 3776
1D Compatibility (HY) -2000 + (ID) 200
Total energy: 5908.0 ( 66.38 by residue)
QMean score : -0.483
(partial model without unconserved sides chains):
PDB file :
Tito_2PZZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PZZ-query.scw
PDB file :
Tito_Scwrl_2PZZ.pdb
: