Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKECRDFYRQIQHTYNDIAVREDAVLSSILLSASNGLIKTSDVPRVAYELTQQLENNEIEKSFESLATVKELKKSAKKLSERYEQNKVTTGLLSKVFGNH
2BL8 Chain:A ((22-76))
---------------------PKYSDILEVLQKVYLKLE----PSPLINRLVNYLYFTAYTNKIRFTEYQEELIRNLSEIGRTAGINGLYRADYGDKSQF-
General information:
TITO was launched using:
RESULT:
Template:
2BL8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3188 for 233 contacts (-13.7/contact) +
2D Compatibility (PS) -4869 + (NN) 357 + (LL) 1936
1D Compatibility (HY) -1200 + (ID) 300
Total energy: -7264.0 ( -31.18 by residue)
QMean score : 0.359
(partial model without unconserved sides chains):
PDB file :
Tito_2BL8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BL8-query.scw
PDB file :
Tito_Scwrl_2BL8.pdb
: