Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVNYPHQLIRKTTVTKSKKKKIDFANRGMSFEAAINATNDYYLSHELAVIHKKPTPVQIVKVDYPKRSRAKIVEAYFRQASTTDYSGVYKGYYIDFEAKETRQKTAMPMKNFHAHQIEHMANV-LQQKGICFVLLHFSTLKETYLLPANELISFYQIDKGNKSMPIDYIRKNGFFVKESAFPQVPYLDIIEEKLLGGDYN
1GEF Chain:A ((31-117))---------------------------------------------------------------------------------KVDLVAGNGKKYLCIEVKVTK-KDHL---YVGKRDMGRLIEFSRRFGGIPVLAVKFLNV-GWRFIEVSPKIEKFV-FTPSSGVSLEVLLGIQKTLE-----------------------


General information:
TITO was launched using:
RESULT:

Template: 1GEF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31380 for 569 contacts (-55.1/contact) +
2D Compatibility (PS) -9424 + (NN) -4254 + (LL) 8540
1D Compatibility (HY) -5200 + (ID) 500
Total energy: -42218.0 ( -74.20 by residue)
QMean score : 0.166

(partial model without unconserved sides chains):
PDB file : Tito_1GEF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GEF-query.scw
PDB file : Tito_Scwrl_1GEF.pdb: