Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVNYPHQLIRKTTVTKSKKKKIDFANRGMSFEAAINATNDYYLSHELAVIHKKPTPVQIVKVDYPKRSRAKIVEAYFRQASTTDYSGVYKGYYIDFEAKETRQKTAMPMKNFHAHQIEHMANV-LQQKGICFVLLHFSTLKETYLLPANELISFYQIDKGNKSMPIDYIRKNGFFVKESAFPQVPYLDIIEEKLLGGDYN |
1GEF Chain:A ((31-117)) | ---------------------------------------------------------------------------------KVDLVAGNGKKYLCIEVKVTK-KDHL---YVGKRDMGRLIEFSRRFGGIPVLAVKFLNV-GWRFIEVSPKIEKFV-FTPSSGVSLEVLLGIQKTLE----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GEF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31380 for 569 contacts (-55.1/contact) +
2D Compatibility (PS) -9424 + (NN) -4254 + (LL) 8540
1D Compatibility (HY) -5200 + (ID) 500
Total energy: -42218.0 ( -74.20 by residue)
QMean score : 0.166
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