Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MCKYKAIIFDMDGVLFDTELFYYKRRERFLKQHGITIDHLPMNFFIGGNMKQVWKSVLGDQYDTWDIDKLQQDYSR-----YKEDNPLPYKDLIFQDCKRVIEKLHHKGYLLGLASSSTRHDIMLALESFNLDTYFKVILSGEEFSESKPNPAIYNRAAELLDIPKQQILIVEDSEKGITAGIAAGIDVWAIEDKYFGMNQSQANVLVSDLSQFFVKLDNY
4EX6 Chain:A ((20-212))
----RGVILDLDGTLADTPAAIATITAEVLAAMGTAVSRGAILSTVGRPLPASLAGLLGVPVEDPRVAEATEEYGRRFGAHVRAAGP----RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTAV
General information:
TITO was launched using:
RESULT:
Template:
4EX6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97131 for 1590 contacts (-61.1/contact) +
2D Compatibility (PS) -20974 + (NN) -15641 + (LL) 612
1D Compatibility (HY) -7200 + (ID) 2050
Total energy: -142384.0 ( -89.55 by residue)
QMean score : 0.519
(partial model without unconserved sides chains):
PDB file :
Tito_4EX6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EX6-query.scw
PDB file :
Tito_Scwrl_4EX6.pdb
: