Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEQIKLSKSDRQKVWWRSQFLQGSWNYERMQNMGWAYALIPALKKLYTTKEDRAAALERHMEFFNTHPYVAAPIIGVTLALEEEKASGTPVEDKAIQGVKIGMMGPLAGIGDPVFWFTVRPILGALGASLASAGNILGPIIFFVGWNLIRMSFLWYTQELGYKSGKEITKDMSGGILQDITKGASILGMFILAVLVKRWVAINFTVDLPKKTLSEGAYINFPKDHVSGQQLHDILGQVQSGLSLDKMQPQTLQGQLDSLIPGLAGLLLTFFCMWLLKKKVSPITIIIGLFIVGILARLAGVM |
| 2DW4 Chain:A ((479-532)) | -----------------------------------------------------------------------------------------------AVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGEL------FLFWNL--APILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFLG----------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2DW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -14323 for 209 contacts (-68.5/contact) +
2D Compatibility (PS) -5142 + (NN) 1486 + (LL) 9756
1D Compatibility (HY) -5600 + (ID) 850
Total energy: -14673.0 ( -70.21 by residue)
QMean score : -0.355
|
|
|