Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLIWSHLFAIVSILGIWYYHVKIDHLMVILLASVLSLEMGFIAYYSRNIFIRLLASLGLLFFYPQSLGIFLSLVSLEWSTKDIWQSNHFMQYMAYLLAILFIISSALLSLKLLVNAYDISKRYQLATVIPVMLFSSFAFCLEKSGSLGLEGIILNPSAFFNGIQTNMANLDFKALSCLFLVQLLLWGILMED |
| 2KET Chain:A ((1-7)) | -----------------------------------------------------------------------------------------------------------------------------------------------GRFKRFRKKFKKLFKKLSPVIPLLHL------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2KET.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 806 for 18 contacts (44.8/contact) +
2D Compatibility (PS) -819 + (NN) -496 + (LL) 16580
1D Compatibility (HY) -400 + (ID) 0
Total energy: 15671.0 ( 870.61 by residue)
QMean score : -0.171
|
|
|