Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLNKIILSTAALTALFLGYNSVTADTYNNYQPHRSNNMDLTEEYNYNNQIELQERIKKLNIPFKEKLALLRKVKSRQDSYVLDTLRKEVENKNSEYSELEQEYQRISALIDAKFPQGKSSLAEKLHKELIWDLDGVKYDEGISKRTALKKLEGKINEYTKKYSYLF |
2Y9J Chain:A ((179-242)) | -----------------------------------------------------QEKERFQVLPGRDKMLYVAAQNERDTLWARQVLARGDYDKNARVINENEENKRISIWLDTYYPQ-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y9J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16689 for 346 contacts (48.2/contact) +
2D Compatibility (PS) -6530 + (NN) 2831 + (LL) 6716
1D Compatibility (HY) -800 + (ID) 750
Total energy: 18156.0 ( 52.47 by residue)
QMean score : 0.332
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