Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVVLGKLPDGIFTLLRFNDEG---GQLTHISESEALWLTLELAPEKMDCI
3BFM Chain:A ((16-59))
--AAGPGQDPFDLACQKAELGVDAGLVVYELGTDVLRAALVLAPEVPLAK
General information:
TITO was launched using:
RESULT:
Template:
3BFM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9686 for 212 contacts (-45.7/contact) +
2D Compatibility (PS) -4364 + (NN) -394 + (LL) 400
1D Compatibility (HY) 1200 + (ID) 500
Total energy: -13344.0 ( -62.94 by residue)
QMean score : -0.010
(partial model without unconserved sides chains):
PDB file :
Tito_3BFM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BFM-query.scw
PDB file :
Tito_Scwrl_3BFM.pdb
: