Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLYFPSISEETFDFEADWLVKAMDDNQKRILFVGQGKNGDLELELNYQDNPEPFDNLSVGELVQLPKELFVVPETISYQPQYECF
3RUK Chain:A ((164-207))
-----------------------------ICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVK
General information:
TITO was launched using:
RESULT:
Template:
3RUK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6167 for 157 contacts (39.3/contact) +
2D Compatibility (PS) -4425 + (NN) 1081 + (LL) 2228
1D Compatibility (HY) -3200 + (ID) 900
Total energy: 951.0 ( 6.06 by residue)
QMean score : -0.056
(partial model without unconserved sides chains):
PDB file :
Tito_3RUK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RUK-query.scw
PDB file :
Tito_Scwrl_3RUK.pdb
: