Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAIKQTQIKSSEKRSLGRKQDKKKGNQEYFDLHSCVELLDVKAIIDNRQAYIQLVDYGYLQLMEIPGKDLGSLSYNEIRRTIDNFEKWLTDFNTDIQIETTTLPTNTDTQIMDLRHHLSLVRQEMAKLLPDSRRYMQLHDR-------ELLLRNDIQVEESIQQEIYNTEFILWLFAPTTTELDELVRKAKSYGNNDFVPQEITKVKKEQIIKQFNNMNEKV |
3M5I Chain:B ((70-158)) | --------------------------------------------------------------------------FNEIEQQIGNVINWTRDAMTEIWSYNAELLVAMENQ-----HTIDLADSEMSKLYERVKKQLRENAEEDGTGCFEIFHKCDDQCMESIRNNTYDHTQYRTESLQNRIQIDS------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 254 for 353 contacts (0.7/contact) +
2D Compatibility (PS) -8237 + (NN) 3956 + (LL) 8568
1D Compatibility (HY) -3600 + (ID) 1200
Total energy: -259.0 ( -0.73 by residue)
QMean score : 0.183
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