Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPELSKRRQRQLKAQGYDLAFLSRIQPQGNIDFKKDDRSWMSGDGHHTVLHFYEYPSEDLDRFWLSDLMLIPGTRSFLSLYRANNRELKQEIKDAIEEKSTRITGNSKIVDNQQELDEIKDLTQLDREITKKNIAMLGMYVRNYSSSSTKEALFKKVEDIKDKTSNFKSTILSGELDFEYHAPFIPAQYQIDLPNRRRGIPIRAHDLAGGYFFNHTKLEDQRGVYMGWTPTKGAVNFNFLERDERRTRSFMILSGNPKMGQRSFLLKHTDGLYAKGNYIRNFDANGTFLDQTRQQHGLILDLSGEANRINIFQVFPTVTNEEGTEIDKKKSYKLHIEKLKSIFKLLNSEVTGDDLTTLGDMLNDFYIEEGLWARNPKLNPEKLKATDLVNDDYP---ILSDFILFADDYKRSLMAQSKPDEIEIKSVNRIYKTFNELLTTNAEMFEGTTEFQDISSEQVVTFDLSGLKGTPNLLNAQIFSVLSLVSADIVNNGKRSKQLLKANPHLTEMDMEHYIVNISEAQTLINPKYESSVELLADMIDTMGENFAGVVLSVNSLRGILFEAGAGNHKDPYVTAVQRIFGLMQYRVFAQTDETTIPLLANALTGSMNQSELETLPRLAKGQLFMNIAGVGNLVFNQQLLAPEIKRYGGIQ |
| 3SL7 Chain:A ((35-138)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKVTGLPVIDDNWTLVGVVSDYDLLAL----------------------TWKTFNELQKLISKTY-GKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQIKRNA--------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SL7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14021 for 438 contacts (-32.0/contact) +
2D Compatibility (PS) -8649 + (NN) -1182 + (LL) 34436
1D Compatibility (HY) -5600 + (ID) 1150
Total energy: 3834.0 ( 8.75 by residue)
QMean score : 0.195
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