Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEWIKENMIYVIAIGLLLIFSGVAVYRSVTQNKSQSPQVEHMKPLDSSSSSMDESETTDEKNYRTAKLKLEHPYSESSEEQKQEVRKAFDEAIKAIQQANHLTEVKGTLDNHLSMSQDGMIQTLAMAILVNQYSYQSSKLEVTPSENEDVVQFLIVLTKQGEDSCYFVGNFNTTVSQIQLKAYVGGNIGGTFG |
2NLX Chain:A ((27-69)) | ----------------------------------------------------------------QTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQHSLQDVKALGIAGQMHGATLLDAQQRVLRPAILWNDGRCAQECTLLEARVPQSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NLX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6352 for 191 contacts (33.3/contact) +
2D Compatibility (PS) -4533 + (NN) -299 + (LL) 4600
1D Compatibility (HY) -2000 + (ID) 700
Total energy: 3420.0 ( 17.91 by residue)
QMean score : 0.501
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