Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIFDERELKERFTHENRVSFYEFVAKYDAQMVPVMKAKGYRCIHSMERTVVFTFGEFTIRRRRWQKGEHWVVPVDEKLGLKKNVRYSLEFMYQIASLATM---------MPYEKVIKVVQMMYCIVITKPTVVKAVKISRELLKEKEAYRFFDEDIPVDKEPVDMIYLEGDGVMVKAREEGLDNRNVDLSHFVVHTGSQKVGSNRFVLQNKKEFVSLDNRQTRQKILDYLYNHFYIAPNTLLITNSDGGHGYTPYVFKEIAKALKVKQHEHFWDRYHVNEKIKSFFKLYPVELMTGAFQSIKQHDKEKLRTVLDTTEALILMEEEMEGFNQFKRKLLNNFQYTKSAELRGFSRAGIGVMESQHRKITYRMKKRGMYWTIQGAETMSQLIVLSYEGQLRDLFFGSWREDYQKYQELENLSAGKIKHEQNKINKRYDLQTLGRLRYGRHRNL |
| 2RN7 Chain:A ((5-56)) | ------------------------------------------------------------------------------------TRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKI------GCTPETLRVWVRQHERDTGGDDGGLTTAERQRLKEPERENRELRRSNDILRLASAYFAKAEFDRLWKK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RN7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35463 for 251 contacts (-141.3/contact) +
2D Compatibility (PS) -4412 + (NN) -81 + (LL) 27316
1D Compatibility (HY) 1200 + (ID) 300
Total energy: -11740.0 ( -46.77 by residue)
QMean score : 0.479
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