Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTISSAEWEIMRVVWAQQNTTSNEILAVLLEKYDWTPSTVKTLLRRLLDKGYVSREKMGKGFSYSPLIDEDLAMMSEVDSVFQKVCQTKHVAIVRHLLESIPMTEKDRLNLQSSLEAKKGKTLERVACNCIPGQCQCH
2K4B Chain:A ((31-99))
FNVSNAELIVMRVIWSLGEARVDEIYAQIPQELEWSLATVKTLLGRLVKKEMLSTEKEGRKFVYRPLME---------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2K4B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29940 for 419 contacts (-71.5/contact) +
2D Compatibility (PS) -6831 + (NN) 2285 + (LL) 5652
1D Compatibility (HY) -8400 + (ID) 1400
Total energy: -38634.0 ( -92.21 by residue)
QMean score : 0.492
(partial model without unconserved sides chains):
PDB file :
Tito_2K4B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K4B-query.scw
PDB file :
Tito_Scwrl_2K4B.pdb
: