Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKKLLRKEVLITLKSQPQAYKSEVDCKLLEAFIKTKAYQNSCVIATYLSFDYEYNTQLLIKQALCDGKRVLVPKTYPKGKMIFVDYQKDNLRATPFGLLEPVNDRAVEKASIDLIHVPGLIFNNKGFRIGYGAGYFDRYLSDFEGDTISTIYRCQRQDFVEEKHDVAVKEVLCL
1WKC Chain:A ((20-145))
------------------KALSRAVGAALLP-WLRERGFRH---ILLYHPLPHELN---LLPLMEAYPARYYLPKVAGKGLTV---HPFGPLA-------EPTTPPE-DPRVLDLVVVPGLAFDREGYRLGHGQGFYDRFLKEVRAATVGVVPQALLFPALPRDPWDVPVDHLAT
General information:
TITO was launched using:
RESULT:
Template:
1WKC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33353 for 819 contacts (-40.7/contact) +
2D Compatibility (PS) -12508 + (NN) -2928 + (LL) 3396
1D Compatibility (HY) -8000 + (ID) 1650
Total energy: -55043.0 ( -67.21 by residue)
QMean score : 0.332
(partial model without unconserved sides chains):
PDB file :
Tito_1WKC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WKC-query.scw
PDB file :
Tito_Scwrl_1WKC.pdb
: