Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKEKMMSFMTIASIALLGSGVVCANDVADPVAGTTDVVVVPVSPQPTTPSEHTGTDTTNKIVDSTKPSEDKVADSTDQLIPPVKSDLETSEDKVTDPTETKPSKEKTEEPVKSNDSEVIPEQPKSEEVKKAEENTGASTTETPKPVTKPVIETPIVTNTGYTVLGTQDGNVWVQTETGNVLKPAIAIGAVKQKDGTVALKTKDGKLEVLPSTGETKTILAILGGLAILGAIWVGWKENIKKYLTFLKKKSKK |
| 2L8S Chain:A ((17-30)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FAGLLLLMLLILALWKIGFFKRPLKKKMEK-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2L8S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2947 for 49 contacts (-60.1/contact) +
2D Compatibility (PS) -1407 + (NN) 273 + (LL) 11192
1D Compatibility (HY) -1600 + (ID) 150
Total energy: 5361.0 ( 109.41 by residue)
QMean score : 0.298
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