Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKKNKVFLGVLLVLVVILGGGVLFYQSQFQKTTNQALAIAYKDAKVAKKDVIHQKIDKEFENFRGSYEIEFNTKSAEYSYHVDAKTGQILERDMDNNGFSKSTSQSSSSSSQKSHKISQEEAKKIAFKDANIEESEVSNLKIKEEI-----ENGKSVYDIDFVDLKNKNEVDYQIDAETGKIIERSRDHMND |
3K9X Chain:B ((15-112)) | ----------------------------------------------------------------------------------------QALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 52142 for 583 contacts (89.4/contact) +
2D Compatibility (PS) -9387 + (NN) 2289 + (LL) 7168
1D Compatibility (HY) -2000 + (ID) 1150
Total energy: 49062.0 ( 84.15 by residue)
QMean score : -0.041
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