Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTGIIEEMGQVSRIRNGIKSQQLSIDAPK-LVPLLRKGDSVAVNGVCLTVLDKSETAFIADVMPESMMRTSLAALRLHSKVNLELALRSDSRLGGHFVLGHVDGVGKIEKIQKDDIAVRFSIDAPPSIMSYIIEKGSVALDGISLTVVSFTEHSFEVSVIPHTMAQTNLSLKKVGDLLNIEVDVLGKYAEKFLAPTNRTNHTSSVMDWSFLSENGY
3A3B Chain:B ((1-181))
MFKGIVQGAGIIKKISKNDDTQRHGITFPKDILESVEKGTVMLVNGCSLTVVRISGDVVYFDI-DQAINTTTFRELEVGNKVNLEVRP-------KGALTGNIKGVATVDNITEEEDRLKVYIKIPKDLIENILSEDHIGINGVSHSIEEISDDIIFINYPKNLSITTNLGTLEKGSDVNVETLN--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3A3B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89614 for 1366 contacts (-65.6/contact) +
2D Compatibility (PS) -17372 + (NN) 5180 + (LL) 2292
1D Compatibility (HY) -12400 + (ID) 2100
Total energy: -114014.0 ( -83.47 by residue)
QMean score : 0.332
(partial model without unconserved sides chains):
PDB file :
Tito_3A3B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A3B-query.scw
PDB file :
Tito_Scwrl_3A3B.pdb
: